STRINGSTRING
Ajs_1948 Ajs_1948 Ajs_1949 Ajs_1949 Ajs_1947 Ajs_1947 Ajs_0553 Ajs_0553 Ajs_1950 Ajs_1950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_1948PFAM: inner-membrane translocator; KEGG: pau:PA14_14380 putative transmembrane component of ABC transporte; Belongs to the binding-protein-dependent transport system permease family. (295 aa)    
Predicted Functional Partners:
Ajs_1949
PFAM: protein of unknown function DUF534; KEGG: pae:PA3836 hypothetical protein.
    0.996
Ajs_1947
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB3354 putative ABC-transporter ATP-binding component.
 
    0.979
Ajs_0553
KEGG: rfr:Rfer_2037 hypothetical protein.
 
    0.863
Ajs_1950
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
       0.410
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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