STRINGSTRING
ABR70287.1 ABR70287.1 bamB bamB hisS hisS ABR70284.1 ABR70284.1 der der ABR71319.1 ABR71319.1 ABR69682.1 ABR69682.1 ABR71828.1 ABR71828.1 tatA tatA ABR72488.1 ABR72488.1 ispG ispG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABR70287.1KEGG: pau:PA14_14900 hypothetical protein. (213 aa)    
Predicted Functional Partners:
bamB
Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.972
hisS
TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: maq:Maqu_1128 histidyl-tRNA synthetase.
  
    0.923
ABR70284.1
KEGG: vch:VC0758 hypothetical protein.
 
    0.777
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.772
ABR71319.1
PFAM: Stringent starvation protein B; KEGG: pha:PSHAa2526 stringent starvation protein B.
  
    0.755
ABR69682.1
PFAM: DSBA oxidoreductase; KEGG: hch:HCH_01016 thiol-disulfide isomerase and thioredoxins.
  
     0.747
ABR71828.1
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: pfo:Pfl_4959 DNA polymerase III, delta subunit.
  
     0.728
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
     0.725
ABR72488.1
PFAM: protein of unknown function DUF484; KEGG: hch:HCH_00299 hypothetical protein.
  
    0.724
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
  
    0.723
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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