STRINGSTRING
Dbac_0905 Dbac_0905 Dbac_2945 Dbac_2945 Dbac_0903 Dbac_0903 Dbac_0904 Dbac_0904 Dbac_1014 Dbac_1014 htpX htpX Dbac_2125 Dbac_2125 Dbac_1142 Dbac_1142
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_0905PFAM: protein of unknown function DUF533; KEGG: pau:PA14_16370 hypothetical protein. (228 aa)    
Predicted Functional Partners:
Dbac_2945
KEGG: ypb:YPTS_1283 hypothetical protein.
  
  
 0.466
Dbac_0903
Putative transcriptional regulator, PaaX family; KEGG: lbf:LBF_2391 hypothetical protein.
       0.463
Dbac_0904
PFAM: major facilitator superfamily MFS_1; KEGG: afu:AF0367 oxalate/formate antiporter (OxlT- 2).
       0.463
Dbac_1014
KEGG: dvu:DVU3384 zinc resistance-associated protein.
  
  
 0.451
htpX
PFAM: peptidase M48 Ste24p; KEGG: gme:Gmet_1156 HtpX-2 peptidase; Belongs to the peptidase M48B family.
   
    0.445
Dbac_2125
PFAM: peptidase M48 Ste24p; KEGG: maq:Maqu_3388 peptidase M48, Ste24p.
   
    0.445
Dbac_1142
PFAM: glucose sorbosone dehydrogenase; KEGG: cya:CYA_2304 glucose/sorbosone dehydrogenase family protein.
  
    0.412
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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