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Fbal_2065 Fbal_2065 Fbal_2064 Fbal_2064 Fbal_2893 Fbal_2893 Fbal_1221 Fbal_1221 Fbal_0619 Fbal_0619 Fbal_0203 Fbal_0203 Fbal_3175 Fbal_3175 Fbal_2261 Fbal_2261 Fbal_3415 Fbal_3415 Fbal_3412 Fbal_3412 Fbal_2066 Fbal_2066
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Fbal_2065Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: pau:PA14_18200 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A3LE25 Putative uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain. (305 aa)    
Predicted Functional Partners:
Fbal_2064
InterPro IPR002202; KEGG: cps:CPS_2860 hypothetical protein; SPTR: A3KT77 Putative uncharacterized protein.
       0.773
Fbal_2893
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: ppr:PBPRA0141 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A3JKB1 Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
  
     0.688
Fbal_1221
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: sse:Ssed_1996 HTH-type transcriptional regulator XapR; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: P23841 HTH-type transcriptional regulator xapR; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
  
     0.681
Fbal_0619
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119: IPR000835; KEGG: shm:Shewmr7_3323 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; regulatory protein MarR; SPTR: A2V5X9 Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.
  
     0.661
Fbal_0203
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: vfm:VFMJ11_2114 transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A3UYP2 Transcriptional regulators, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
  
     0.650
Fbal_3175
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: spl:Spea_1727 LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: A3XST1 Hypothetical transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.
  
     0.638
Fbal_2261
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: shw:Sputw3181_3361 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: A2UWS9 Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
  
     0.612
Fbal_3415
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: slo:Shew_2959 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: P52686 SDS degradation transcriptional activation protein; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.
  
     0.609
Fbal_3412
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: slo:Shew_2959 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: P52686 SDS degradation transcriptional activation protein; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
  
     0.576
Fbal_2066
Zinc-binding alcohol dehydrogenase family protein; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149: IPR002364: IPR014182; KEGG: pau:PA14_18160 putative oxidoreductase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: A3LE27 Putative uncharacterized protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc- [...]
       0.545
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
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