STRINGSTRING
Tola_1413 Tola_1413 Tola_1411 Tola_1411 Tola_1417 Tola_1417 Tola_1412 Tola_1412 Tola_1410 Tola_1410 Tola_1408 Tola_1408 Tola_1409 Tola_1409 Tola_1414 Tola_1414 Tola_1407 Tola_1407 Tola_0090 Tola_0090 Tola_1406 Tola_1406
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tola_1413PFAM: Alginate lyase; KEGG: pau:PA14_18470 poly(beta-D-mannuronate) lyase. (384 aa)    
Predicted Functional Partners:
Tola_1411
KEGG: pfo:Pfl01_0955 carbohydrate binding and sugar hydrolysis.
 
 
 0.998
Tola_1417
Hypothetical protein; KEGG: pap:PSPA7_1600 alginate-C5-mannuronan-epimerase AlgG.
 
 
 0.985
Tola_1412
KEGG: pmy:Pmen_1025 hypothetical protein.
 
  
 0.984
Tola_1410
SMART: Sel1 domain protein repeat-containing protein; KEGG: pag:PLES_14901 alginate biosynthetic protein AlgK precursor.
 
  
 0.916
Tola_1408
KEGG: pag:PLES_14921 alginate biosynthesis protein Alg8.
 
  
 0.892
Tola_1409
PFAM: type IV pilus assembly PilZ; KEGG: pag:PLES_14911 alginate biosynthesis protein Alg44.
  
  
 0.875
Tola_1414
KEGG: pmy:Pmen_1677 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II.
  
  
 0.849
Tola_1407
Nucleotide sugar dehydrogenase; KEGG: pmy:Pmen_1031 GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.783
Tola_0090
Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
 
   
 0.768
Tola_1406
PFAM: Alginate lyase 2; KEGG: pmy:Pmen_3057 hypothetical protein.
  
   
 0.703
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
Server load: low (26%) [HD]