STRINGSTRING
Elen_3022 Elen_3022 Elen_0675 Elen_0675 Elen_0157 Elen_0157 Elen_1164 Elen_1164 Elen_1291 Elen_1291 Elen_1567 Elen_1567 Elen_3021 Elen_3021 Elen_2003 Elen_2003 Elen_1863 Elen_1863 Elen_0154 Elen_0154 Elen_3023 Elen_3023
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Elen_3022ATP-dependent transcriptional regulator, MalT- like, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pau:PA14_19850 putative transcriptional regulator. (485 aa)    
Predicted Functional Partners:
Elen_0675
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: kpe:KPK_4054 monoamine regulon transcriptional regulator.
  
     0.709
Elen_0157
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: psa:PST_0394 DNA-binding response regulator CorR.
  
     0.696
Elen_1164
KEGG: scl:sce8104 TetR family transcriptional regulator.
  
     0.689
Elen_1291
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ses:SARI_04030 hypothetical protein.
  
     0.665
Elen_1567
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: aha:AHA_0580 LuxR family transcriptional regulator.
  
     0.583
Elen_3021
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: glo:Glov_0945 succinate dehydrogenase.
 
     0.558
Elen_2003
PFAM: transcriptional activator domain; KEGG: afw:Anae109_1735 SARP family transcriptional regulator.
 
     0.510
Elen_1863
Putative transcriptional regulator, TetR family; KEGG: bha:BH3394 hypothetical protein.
  
     0.501
Elen_0154
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: shl:Shal_2879 LuxR family transcriptional regulator.
  
     0.484
Elen_3023
PFAM: protein of unknown function DUF6 transmembrane; KEGG: slo:Shew_1696 hypothetical protein.
       0.462
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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