Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABR69168.1 | ABR72767.1 | Mmwyl1_0226 | Mmwyl1_3868 | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: maq:Maqu_3213 flavodoxin/nitric oxide synthase. | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | 0.404 |
ABR72534.1 | ABR72767.1 | Mmwyl1_3632 | Mmwyl1_3868 | Putative sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; KEGG: mxa:MXAN_4815 hypothetical protein. | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | 0.415 |
ABR72766.1 | ABR72767.1 | Mmwyl1_3867 | Mmwyl1_3868 | PFAM: Glutathione S-transferase domain; KEGG: pha:PSHAa2192 glutathione S-transferase; Belongs to the GST superfamily. | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | 0.632 |
ABR72767.1 | ABR69168.1 | Mmwyl1_3868 | Mmwyl1_0226 | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: maq:Maqu_3213 flavodoxin/nitric oxide synthase. | 0.404 |
ABR72767.1 | ABR72534.1 | Mmwyl1_3868 | Mmwyl1_3632 | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | Putative sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; KEGG: mxa:MXAN_4815 hypothetical protein. | 0.415 |
ABR72767.1 | ABR72766.1 | Mmwyl1_3868 | Mmwyl1_3867 | PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pau:PA14_20140 ferredoxin--NADP+ reductase. | PFAM: Glutathione S-transferase domain; KEGG: pha:PSHAa2192 glutathione S-transferase; Belongs to the GST superfamily. | 0.632 |