STRINGSTRING
Hoch_3074 Hoch_3074 Hoch_3075 Hoch_3075 Hoch_6748 Hoch_6748 Hoch_6747 Hoch_6747
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_3074PFAM: protein of unknown function DUF6 transmembrane; KEGG: pau:PA14_20640 hypothetical protein. (313 aa)    
Predicted Functional Partners:
Hoch_3075
PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6642 GCN5-related N- acetyltransferase.
       0.467
Hoch_6748
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hha:Hhal_1678 methyltransferase type 12; Belongs to the class I-like SAM-binding methyltransferase superfamily. Glycine N-methyltransferase family.
 
    0.457
Hoch_6747
PFAM: Methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; Methyltransferase type 12; KEGG: pla:Plav_2857 methyltransferase type 11.
  
     0.419
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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