STRINGSTRING
Cpin_2996 Cpin_2996 Cpin_0142 Cpin_0142 Cpin_6968 Cpin_6968 Cpin_6658 Cpin_6658 Cpin_0175 Cpin_0175 Cpin_1717 Cpin_1717 Cpin_1884 Cpin_1884 Cpin_3602 Cpin_3602 Cpin_3943 Cpin_3943 Cpin_6056 Cpin_6056 Cpin_2050 Cpin_2050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_2996PFAM: Patatin; KEGG: pau:PA14_20870 hypothetical protein. (746 aa)    
Predicted Functional Partners:
Cpin_0142
Hypothetical protein.
  
 0.671
Cpin_6968
TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: met:M446_6695 putative lipoprotein.
  
 0.671
Cpin_6658
PFAM: metallophosphoesterase; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: sus:Acid_4533 pyrrolo-quinoline quinone.
  
 0.625
Cpin_0175
KEGG: scl:sce5067 hypothetical protein.
  
 0.591
Cpin_1717
KEGG: scl:sce5067 hypothetical protein.
  
 0.591
Cpin_1884
KEGG: mxa:MXAN_4170 putative lipoprotein.
  
 0.591
Cpin_3602
KEGG: scl:sce5067 hypothetical protein.
  
 0.591
Cpin_3943
Hypothetical protein.
  
 0.591
Cpin_6056
PFAM: PKD domain containing protein; SMART: PKD domain containing protein.
  
 0.591
Cpin_2050
PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: cak:Caul_2798 membrane-associated zinc metalloprotease.
  
  
 0.556
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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