STRINGSTRING
Spro_4484 Spro_4484 Spro_4485 Spro_4485 Spro_4486 Spro_4486 Spro_4488 Spro_4488 Spro_3644 Spro_3644 Spro_3643 Spro_3643 Spro_3646 Spro_3646 Spro_3645 Spro_3645 Spro_4487 Spro_4487 Spro_1647 Spro_1647 Spro_1648 Spro_1648
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_4484ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pau:PA14_21910 putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
Spro_4485
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_1872 probable permease of ABC transporter.
 
 
 0.996
Spro_4486
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4389 ABC transporter, permease protein.
 
 
 0.993
Spro_4488
PFAM: extracellular solute-binding protein family 1; KEGG: pau:PA14_21960 putative ABC transporter, periplasmic substrate-binding protein.
 
 
 0.992
Spro_3644
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1240 ABC transporter, permease protein.
 0.972
Spro_3643
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_1045 binding-protein-dependent transport systems inner membrane component.
 
 
 0.970
Spro_3646
PFAM: extracellular solute-binding protein family 1; KEGG: ssn:SSON_1697 putative transport protein.
 
 
 0.956
Spro_3645
KEGG: pfo:Pfl_1047 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
  
 
0.911
Spro_4487
KEGG: pau:PA14_21940 hypothetical protein.
 
    0.867
Spro_1647
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1486 putrescine transport system permease protein.
 
 
 0.728
Spro_1648
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2642 putrescine ABC transporter, permease protein.
 
  
 0.679
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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