STRINGSTRING
Hhal_1842 Hhal_1842 Hhal_1841 Hhal_1841 Hhal_1840 Hhal_1840 Hhal_1839 Hhal_1839 murJ murJ Hhal_0519 Hhal_0519 rpsT rpsT Hhal_1837 Hhal_1837 ileS ileS lspA lspA ispH ispH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Hhal_1842KEGG: pau:PA14_22650 putative ABC-type uncharacterized transport system. (208 aa)    
Predicted Functional Partners:
Hhal_1841
PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein.
 
   0.970
Hhal_1840
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nmu:Nmul_A1611 ABC transporter related.
 
    0.961
Hhal_1839
PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein.
 
  
 0.957
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.583
Hhal_0519
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: aeh:Mlg_0894 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.530
rpsT
SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
       0.509
Hhal_1837
KEGG: aeh:Mlg_0851 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; Belongs to the ribF family.
       0.455
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
       0.444
lspA
Signal peptidase II, Aspartic peptidase, MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.438
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.408
Your Current Organism:
Halorhodospira halophila
NCBI taxonomy Id: 349124
Other names: H. halophila SL1, Halorhodospira halophila DSM 244, Halorhodospira halophila SL 1, Halorhodospira halophila SL1, Halorhodospira halophila str. SL1, Halorhodospira halophila strain SL1
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