STRINGSTRING
ABR71087.1 ABR71087.1 ABR71345.1 ABR71345.1 ABR71088.1 ABR71088.1 ABR71086.1 ABR71086.1 ABR71089.1 ABR71089.1 ABR71715.1 ABR71715.1 nfuA nfuA ABR69261.1 ABR69261.1 ABR71449.1 ABR71449.1 ABR71021.1 ABR71021.1 topA topA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Coexpression
Experiments
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[Homology]
Score
ABR71087.1PFAM: protein of unknown function DUF1315; KEGG: pau:PA14_24245 hypothetical protein. (93 aa)    
Predicted Functional Partners:
ABR71345.1
PFAM: Methionine sulfoxide reductase B; KEGG: chu:CHU_0754 peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.896
ABR71088.1
KEGG: pfl:PFL_3282 hypothetical protein.
 
    0.869
ABR71086.1
PFAM: Rhomboid family protein; KEGG: psb:Psyr_1687 rhomboid-like protein.
 
     0.853
ABR71089.1
TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ppu:PP_2017 aminopeptidase N.
       0.827
ABR71715.1
Succinate dehydrogenase hydrophobic membrane anchor; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
    0.753
nfuA
HesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
     0.745
ABR69261.1
KEGG: pfo:Pfl_0089 hypothetical protein.
  
     0.741
ABR71449.1
PFAM: protein of unknown function DUF709; KEGG: csa:Csal_1462 protein of unknown function DUF709.
  
     0.719
ABR71021.1
PFAM: tRNA--hydroxylase; KEGG: abo:ABO_1203 tRNA-(ms(2)io(6)a)-hydroxylase.
  
     0.717
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
     0.717
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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