Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Pnap_0437 | Pnap_1645 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mca:MCA1204 sensory box histidine kinase/response regulator. | KEGG: pau:PA14_24510 hypothetical protein. | 0.573 |
Pnap_0437 | Pnap_1703 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mca:MCA1204 sensory box histidine kinase/response regulator. | Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.968 |
Pnap_1639 | Pnap_1640 | Hypothetical protein. | KEGG: rxy:Rxyl_2670 hypothetical protein. | 0.718 |
Pnap_1639 | Pnap_1641 | Hypothetical protein. | Hypothetical protein. | 0.550 |
Pnap_1639 | Pnap_1642 | Hypothetical protein. | KEGG: nmu:Nmul_A2433 hypothetical protein. | 0.536 |
Pnap_1639 | Pnap_1643 | Hypothetical protein. | PFAM: glycosyl transferase, group 1; KEGG: nmu:Nmul_A2434 glycosyl transferase, group 1. | 0.536 |
Pnap_1639 | Pnap_1644 | Hypothetical protein. | KEGG: pfl:PFL_2976 hypothetical protein. | 0.536 |
Pnap_1639 | Pnap_1645 | Hypothetical protein. | KEGG: pau:PA14_24510 hypothetical protein. | 0.493 |
Pnap_1640 | Pnap_1639 | KEGG: rxy:Rxyl_2670 hypothetical protein. | Hypothetical protein. | 0.718 |
Pnap_1640 | Pnap_1641 | KEGG: rxy:Rxyl_2670 hypothetical protein. | Hypothetical protein. | 0.590 |
Pnap_1640 | Pnap_1642 | KEGG: rxy:Rxyl_2670 hypothetical protein. | KEGG: nmu:Nmul_A2433 hypothetical protein. | 0.673 |
Pnap_1640 | Pnap_1643 | KEGG: rxy:Rxyl_2670 hypothetical protein. | PFAM: glycosyl transferase, group 1; KEGG: nmu:Nmul_A2434 glycosyl transferase, group 1. | 0.722 |
Pnap_1640 | Pnap_1644 | KEGG: rxy:Rxyl_2670 hypothetical protein. | KEGG: pfl:PFL_2976 hypothetical protein. | 0.601 |
Pnap_1640 | Pnap_1645 | KEGG: rxy:Rxyl_2670 hypothetical protein. | KEGG: pau:PA14_24510 hypothetical protein. | 0.527 |
Pnap_1640 | Pnap_1647 | KEGG: rxy:Rxyl_2670 hypothetical protein. | KEGG: nmu:Nmul_A2432 putative signal peptide protein. | 0.512 |
Pnap_1641 | Pnap_1639 | Hypothetical protein. | Hypothetical protein. | 0.550 |
Pnap_1641 | Pnap_1640 | Hypothetical protein. | KEGG: rxy:Rxyl_2670 hypothetical protein. | 0.590 |
Pnap_1641 | Pnap_1642 | Hypothetical protein. | KEGG: nmu:Nmul_A2433 hypothetical protein. | 0.752 |
Pnap_1641 | Pnap_1643 | Hypothetical protein. | PFAM: glycosyl transferase, group 1; KEGG: nmu:Nmul_A2434 glycosyl transferase, group 1. | 0.752 |
Pnap_1641 | Pnap_1644 | Hypothetical protein. | KEGG: pfl:PFL_2976 hypothetical protein. | 0.752 |
page 1 of 4