STRINGSTRING
Maqu_1900 Maqu_1900 Maqu_1899 Maqu_1899 Maqu_1901 Maqu_1901 Maqu_1898 Maqu_1898 Maqu_1902 Maqu_1902 Maqu_1904 Maqu_1904 Maqu_1903 Maqu_1903 htpG htpG dnaK dnaK alaS alaS Maqu_2299 Maqu_2299
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1900KEGG: pau:PA14_24530 hypothetical protein. (329 aa)    
Predicted Functional Partners:
Maqu_1899
PFAM: glycosyl transferase, group 1; KEGG: nmu:Nmul_A1732 glycosyl transferase, group 1.
   
 
 0.837
Maqu_1901
KEGG: pae:PA3061 hypothetical protein.
  
  
 0.831
Maqu_1898
KEGG: pfl:PFL_2978 hypothetical protein.
     
 0.829
Maqu_1902
KEGG: pau:PA14_24500 putative lipoprotein.
     
 0.825
Maqu_1904
KEGG: pae:PA3064 hypothetical protein.
     
 0.825
Maqu_1903
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: nmu:Nmul_A1735 tetratricopeptide TPR_4.
       0.777
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.592
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.537
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.529
Maqu_2299
KEGG: csa:Csal_0952 hypothetical protein.
   
 0.527
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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