STRINGSTRING
Gbro_4355 Gbro_4355 Gbro_4356 Gbro_4356 Gbro_4357 Gbro_4357 Gbro_2003 Gbro_2003 Gbro_2016 Gbro_2016 Gbro_4423 Gbro_4423 Gbro_3379 Gbro_3379 Gbro_1531 Gbro_1531 Gbro_4358 Gbro_4358 Gbro_4774 Gbro_4774
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
Gbro_4355PFAM: beta-lactamase domain protein; KEGG: pau:PA14_24810 hypothetical protein. (310 aa)    
Predicted Functional Partners:
Gbro_4356
KEGG: reh:H16_B1480 nitrilotriacetate monooxygenase component A.
       0.623
Gbro_4357
PFAM: NLPA lipoprotein; KEGG: kpe:KPK_0978 ABC transporter, periplasmic substrate-binding protein.
       0.623
Gbro_2003
Ceramidase; PFAM: Neutral/alkaline nonlysosomal ceramidase; KEGG: pap:PSPA7_4675 hypothetical protein.
  
 
 
 0.539
Gbro_2016
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: maq:Maqu_2848 NADH:flavin oxidoreductase/NADH oxidase.
  
 0.493
Gbro_4423
KEGG: swd:Swoo_4116 hypothetical protein.
  
     0.449
Gbro_3379
KEGG: hch:HCH_02057 major facilitator superfamily permease.
  
     0.434
Gbro_1531
PFAM: transcriptional regulator PadR family protein; KEGG: bte:BTH_I3292 PadR family transcriptional regulator.
  
    0.411
Gbro_4358
Hypothetical protein.
       0.411
Gbro_4774
KEGG: prw:PsycPRwf_0069 cholesterol oxidase.
  
     0.402
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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