STRINGSTRING
EEF59160.1 EEF59160.1 EEF59161.1 EEF59161.1 EEF62740.1 EEF62740.1 EEF59159.1 EEF59159.1 EEF62567.1 EEF62567.1 EEF59162.1 EEF59162.1 EEF57279.1 EEF57279.1 EEF57630.1 EEF57630.1 EEF58023.1 EEF58023.1 EEF58097.1 EEF58097.1 EEF58681.1 EEF58681.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF59160.1KEGG: pau:PA14_24860 cytochrome c Snr1. (474 aa)    
Predicted Functional Partners:
EEF59161.1
PFAM: protein of unknown function DUF296; KEGG: chu:CHU_1066 hypothetical protein.
       0.613
EEF62740.1
PFAM: PRC-barrel domain protein; KEGG: nmu:Nmul_A1923 PRC-barrel.
  
     0.552
EEF59159.1
KEGG: rba:RB5008 signal peptide; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.516
EEF62567.1
PFAM: PRC-barrel domain protein; KEGG: rba:RB12301 hypothetical protein.
  
     0.433
EEF59162.1
PFAM: putative phosphatase regulatory subunit; KEGG: bta:539466 protein phosphatase 1, regulatory (inhibitor) subunit 3C.
       0.431
EEF57279.1
NHL repeat containing protein; PFAM: binding-protein-dependent transport systems inner membrane component; NHL repeat containing protein; KEGG: rba:RB10820 ring finger protein HAC1.
   
   0.426
EEF57630.1
Phosphoesterase; PFAM: NHL repeat containing protein; phosphoesterase; SMP-30/Gluconolaconase/LRE domain protein; SMART: WD-40 repeat protein; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein.
   
   0.426
EEF58023.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mxa:MXAN_5304 hypothetical protein.
   
   0.426
EEF58097.1
PFAM: NHL repeat containing protein; KEGG: sus:Acid_6565 NHL repeat-containing protein.
   
   0.426
EEF58681.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: sus:Acid_7814 YVTN beta-propeller repeat-containing protein.
   
   0.426
Your Current Organism:
Pedosphaera parvula
NCBI taxonomy Id: 320771
Other names: P. parvula Ellin514, Pedosphaera parvula Ellin514, Pedosphaera parvula str. Ellin514, Pedosphaera parvula strain Ellin514, bacterium Ellin514
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