STRINGSTRING
Caci_3621 Caci_3621 Caci_3620 Caci_3620 Caci_1114 Caci_1114 Caci_3470 Caci_3470 Caci_7224 Caci_7224 Caci_3622 Caci_3622 Caci_7676 Caci_7676 Caci_2482 Caci_2482 Caci_3497 Caci_3497 Caci_3619 Caci_3619 Caci_2084 Caci_2084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3621PFAM: alpha/beta hydrolase fold protein; KEGG: pau:PA14_26090 putative hydrolase. (335 aa)    
Predicted Functional Partners:
Caci_3620
PFAM: Cupin 2 conserved barrel domain protein; KEGG: ace:Acel_0692 cupin 2 domain-containing protein.
  
    0.774
Caci_1114
PFAM: alpha/beta hydrolase fold protein; KEGG: hau:Haur_4401 alpha/beta hydrolase fold protein.
  
     0.740
Caci_3470
PFAM: alpha/beta hydrolase fold protein; KEGG: sma:SAV_7359 hydrolase.
  
     0.731
Caci_7224
PFAM: alpha/beta hydrolase fold protein; KEGG: krh:KRH_11120 hypothetical protein.
  
     0.698
Caci_3622
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro05809 3-oxoacyl-[acyl-carrier- protein] reductase.
  
   0.665
Caci_7676
PFAM: alpha/beta hydrolase fold protein; KEGG: sco:SCO0939 hydrolase.
  
     0.663
Caci_2482
PFAM: alpha/beta hydrolase fold protein; KEGG: rha:RHA1_ro03350 hydrolase.
  
     0.642
Caci_3497
PFAM: alpha/beta hydrolase fold protein; KEGG: krh:KRH_11120 hypothetical protein.
  
     0.637
Caci_3619
KEGG: rlt:Rleg2_2482 alpha/beta hydrolase fold protein.
 
     0.604
Caci_2084
PFAM: alpha/beta hydrolase fold protein; KEGG: sgr:SGR_1103 putative bromoperoxidase.
  
     0.596
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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