STRINGSTRING
EDY19137.1 EDY19137.1 EDY21154.1 EDY21154.1 EDY19678.1 EDY19678.1 EDY19136.1 EDY19136.1 EDY17665.1 EDY17665.1 EDY19943.1 EDY19943.1 EDY20248.1 EDY20248.1 guaA guaA pal pal EDY21482.1 EDY21482.1 EDY19075.1 EDY19075.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY19137.1PFAM: OmpA/MotB domain protein; KEGG: pau:PA14_26560 putative outer membrane protein precursor. (316 aa)    
Predicted Functional Partners:
EDY21154.1
Peptidase M28; PFAM: protease-associated PA domain protein; peptidase M28; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: rba:RB6120 probable TolB protein.
  
 0.914
EDY19678.1
Hypothetical protein.
  
 0.856
EDY19136.1
Methyltransferase type 11; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_1026 methyltransferase type 11.
       0.773
EDY17665.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: afw:Anae109_1121 outer membrane chaperone Skp (OmpH).
  
 
 0.763
EDY19943.1
PFAM: cytochrome c class I; KEGG: aba:Acid345_0435 hypothetical protein.
  
  0.746
EDY20248.1
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mta:Moth_0735 competence-damaged protein; Belongs to the CinA family.
    
  0.745
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.744
pal
PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: gme:Gmet_3540 WD40-like beta propeller; Belongs to the Pal lipoprotein family.
 
 0.741
EDY21482.1
Malate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: tpt:Tpet_1436 inosine-5'-monophosphate dehydrogenase.
    
 0.728
EDY19075.1
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3-type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome C oxidase mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
  
  0.727
Your Current Organism:
Chthoniobacter flavus
NCBI taxonomy Id: 497964
Other names: C. flavus Ellin428, Chthoniobacter flavus Ellin428, Chthoniobacter flavus str. Ellin428, Chthoniobacter flavus strain Ellin428, bacterium Ellin428
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