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Maqu_0116 Maqu_0116 Maqu_0121 Maqu_0121 Maqu_0117 Maqu_0117 Maqu_0118 Maqu_0118 Maqu_0115 Maqu_0115 Maqu_0119 Maqu_0119 Maqu_1223 Maqu_1223 Maqu_2894 Maqu_2894 prs prs Maqu_2772 Maqu_2772
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_0116PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pau:PA14_27180 putative ErfK/YbiS/YcfS/YnhG family protein. (349 aa)    
Predicted Functional Partners:
Maqu_0121
KEGG: hch:HCH_06401 hypothetical protein.
 
  
 0.723
Maqu_0117
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: abo:ABO_2404 oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.694
Maqu_0118
Nodulation efficiency protein NfeD; PFAM: protein of unknown function DUF107; KEGG: csa:Csal_2767 protein of unknown function DUF107.
       0.634
Maqu_0115
PFAM: protein of unknown function UPF0016; KEGG: sfr:Sfri_0575 protein of unknown function UPF0016.
       0.608
Maqu_0119
PFAM: band 7 protein; KEGG: csa:Csal_2766 band 7 protein.
       0.562
Maqu_1223
KEGG: pfo:Pfl_3376 hypothetical protein.
 
  
 0.509
Maqu_2894
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sde:Sde_2893 hypothetical protein.
 
  
 0.466
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
      0.412
Maqu_2772
N-acetylmuramoyl-L-alanine amidase; PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: hch:HCH_05387 N-acetylmuramoyl-L-alanine amidase.
     
 0.401
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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