STRINGSTRING
Caul_2986 Caul_2986 Caul_4219 Caul_4219 Caul_1300 Caul_1300 Caul_2358 Caul_2358 Caul_0295 Caul_0295 Caul_0294 Caul_0294 Caul_2985 Caul_2985 Caul_0289 Caul_0289 Caul_2988 Caul_2988 Caul_2987 Caul_2987 Caul_4458 Caul_4458
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Caul_2986Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pau:PA14_27900 putative transcriptional regulator. (238 aa)    
Predicted Functional Partners:
Caul_4219
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mes:Meso_2988 transcriptional regulator, histidine utilization repressor, GntR family.
  
     0.744
Caul_1300
Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: ccr:CC_0962 histidine utilization repressor.
  
     0.730
Caul_2358
Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: ccr:CC_0962 histidine utilization repressor.
  
     0.695
Caul_0295
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: ccr:CC_0449 PTS system, N-acetylglucosamine-specific IIABC component.
 
  
 0.642
Caul_0294
Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; sugar-specific permease EIIA 1 domain; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: ccr:CC_0448 PTS system, fructose-specific EIIA/HPr/EI components.
 
   
 0.625
Caul_2985
KEGG: ccr:CC_0651 hypothetical protein.
 
     0.620
Caul_0289
KEGG: ccr:CC_0443 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.606
Caul_2988
KEGG: mlo:mll1439 hypothetical protein.
 
    0.562
Caul_2987
KEGG: xac:XAC1024 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
       0.504
Caul_4458
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sus:Acid_4192 transcriptional regulator, AraC family.
  
  
 0.482
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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