STRINGSTRING
Maqu_2156 Maqu_2156 Maqu_2157 Maqu_2157 Maqu_2155 Maqu_2155 Maqu_2828 Maqu_2828 Maqu_2154 Maqu_2154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_2156KEGG: pau:PA14_28140 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Maqu_2157
KEGG: pae:PA2778 hypothetical protein.
 
    0.970
Maqu_2155
PFAM: glutamine amidotransferase class-I; KEGG: aeh:Mlg_1637 glutamine amidotransferase class-I.
       0.529
Maqu_2828
KEGG: csa:Csal_1035 hypothetical protein.
  
     0.465
Maqu_2154
PFAM: protein of unknown function DUF28; KEGG: csa:Csal_0810 protein of unknown function DUF28.
       0.426
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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