node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ppha_0189 | Ppha_0190 | Ppha_0189 | Ppha_0190 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | KEGG: pmy:Pmen_3425 hypothetical protein. | 0.951 |
Ppha_0189 | Ppha_0191 | Ppha_0189 | Ppha_0191 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | 0.951 |
Ppha_0189 | Ppha_0192 | Ppha_0189 | Ppha_0192 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | KEGG: gur:Gura_3956 hypothetical protein. | 0.400 |
Ppha_0189 | nnrD | Ppha_0189 | Ppha_1309 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.512 |
Ppha_0189 | radA | Ppha_0189 | Ppha_1204 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.501 |
Ppha_0189 | uvrC | Ppha_0189 | Ppha_2063 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.412 |
Ppha_0190 | Ppha_0189 | Ppha_0190 | Ppha_0189 | KEGG: pmy:Pmen_3425 hypothetical protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.951 |
Ppha_0190 | Ppha_0191 | Ppha_0190 | Ppha_0191 | KEGG: pmy:Pmen_3425 hypothetical protein. | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | 0.951 |
Ppha_0190 | Ppha_0192 | Ppha_0190 | Ppha_0192 | KEGG: pmy:Pmen_3425 hypothetical protein. | KEGG: gur:Gura_3956 hypothetical protein. | 0.400 |
Ppha_0191 | Ppha_0189 | Ppha_0191 | Ppha_0189 | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.951 |
Ppha_0191 | Ppha_0190 | Ppha_0191 | Ppha_0190 | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | KEGG: pmy:Pmen_3425 hypothetical protein. | 0.951 |
Ppha_0191 | Ppha_0192 | Ppha_0191 | Ppha_0192 | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | KEGG: gur:Gura_3956 hypothetical protein. | 0.400 |
Ppha_0192 | Ppha_0189 | Ppha_0192 | Ppha_0189 | KEGG: gur:Gura_3956 hypothetical protein. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.400 |
Ppha_0192 | Ppha_0190 | Ppha_0192 | Ppha_0190 | KEGG: gur:Gura_3956 hypothetical protein. | KEGG: pmy:Pmen_3425 hypothetical protein. | 0.400 |
Ppha_0192 | Ppha_0191 | Ppha_0192 | Ppha_0191 | KEGG: gur:Gura_3956 hypothetical protein. | PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein. | 0.400 |
nnrD | Ppha_0189 | Ppha_1309 | Ppha_0189 | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.512 |
radA | Ppha_0189 | Ppha_1204 | Ppha_0189 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.501 |
radA | uvrC | Ppha_1204 | Ppha_2063 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.577 |
uvrC | Ppha_0189 | Ppha_2063 | Ppha_0189 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840 putative helicase. | 0.412 |
uvrC | radA | Ppha_2063 | Ppha_1204 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.577 |