STRINGSTRING
Bphy_5236 Bphy_5236 Bphy_5235 Bphy_5235 Bphy_5232 Bphy_5232 Bphy_5233 Bphy_5233 Bphy_5234 Bphy_5234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bphy_5236KEGG: pau:PA14_29575 hypothetical protein. (105 aa)    
Predicted Functional Partners:
Bphy_5235
Alkanesulfonate monooxygenase; PFAM: luciferase family protein; KEGG: reh:H16_B1865 alkanesulfonate monooxygenase.
       0.426
Bphy_5232
PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_A2930 putative thiosulfate sulfurtransferase, rhodanese domain-containing.
       0.421
Bphy_5233
PFAM: cysteine dioxygenase type I; KEGG: pfl:PFL_1375 hypothetical protein.
       0.421
Bphy_5234
PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_3679 class II aldolase/adducin family protein.
       0.421
Your Current Organism:
Paraburkholderia phymatum
NCBI taxonomy Id: 391038
Other names: Burkholderia phymatum STM815, Burkholderia sp. STM815, P. phymatum STM815, Paraburkholderia phymatum STM815
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