STRINGSTRING
Maqu_3779 Maqu_3779 Maqu_2429 Maqu_2429 Maqu_1358 Maqu_1358 Maqu_2692 Maqu_2692 Maqu_3794 Maqu_3794 Maqu_2201 Maqu_2201 Maqu_3780 Maqu_3780
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
Maqu_3779KEGG: pau:PA14_29690 hypothetical protein. (360 aa)    
Predicted Functional Partners:
Maqu_2429
KEGG: pfo:Pfl_4024 acyl-CoA thioesterase II, putative.
  
    0.680
Maqu_1358
PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_03926 histone acetyltransferase HPA2/related acetyltransferase.
  
     0.631
Maqu_2692
PFAM: phospholipid/glycerol acyltransferase; KEGG: hch:HCH_05295 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.604
Maqu_3794
PFAM: phospholipid/glycerol acyltransferase; KEGG: hch:HCH_02048 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.584
Maqu_2201
PFAM: Phosphoglycerate mutase; KEGG: sfr:Sfri_2072 phosphoglycerate mutase.
  
     0.499
Maqu_3780
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vvy:VV2684 GGDEF family protein.
       0.473
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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