Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF22817.1 | AEF22818.1 | Psefu_2853 | Psefu_2854 | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | KEGG: pfo:Pfl01_3547 hypothetical protein. | 0.634 |
AEF22817.1 | AEF22819.1 | Psefu_2853 | Psefu_2855 | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | KEGG: pap:PSPA7_3915 hypothetical protein. | 0.536 |
AEF22817.1 | AEF22820.1 | Psefu_2853 | Psefu_2856 | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | 0.447 |
AEF22818.1 | AEF22817.1 | Psefu_2854 | Psefu_2853 | KEGG: pfo:Pfl01_3547 hypothetical protein. | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | 0.634 |
AEF22818.1 | AEF22819.1 | Psefu_2854 | Psefu_2855 | KEGG: pfo:Pfl01_3547 hypothetical protein. | KEGG: pap:PSPA7_3915 hypothetical protein. | 0.690 |
AEF22818.1 | AEF22820.1 | Psefu_2854 | Psefu_2856 | KEGG: pfo:Pfl01_3547 hypothetical protein. | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | 0.506 |
AEF22819.1 | AEF22817.1 | Psefu_2855 | Psefu_2853 | KEGG: pap:PSPA7_3915 hypothetical protein. | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | 0.536 |
AEF22819.1 | AEF22818.1 | Psefu_2855 | Psefu_2854 | KEGG: pap:PSPA7_3915 hypothetical protein. | KEGG: pfo:Pfl01_3547 hypothetical protein. | 0.690 |
AEF22819.1 | AEF22820.1 | Psefu_2855 | Psefu_2856 | KEGG: pap:PSPA7_3915 hypothetical protein. | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | 0.615 |
AEF22820.1 | AEF22817.1 | Psefu_2856 | Psefu_2853 | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | DinB family protein; KEGG: pau:PA14_32370 putative DNA damage-inducible gene; manually curated; PFAM: DinB. | 0.447 |
AEF22820.1 | AEF22818.1 | Psefu_2856 | Psefu_2854 | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | KEGG: pfo:Pfl01_3547 hypothetical protein. | 0.506 |
AEF22820.1 | AEF22819.1 | Psefu_2856 | Psefu_2855 | PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: xca:xccb100_0352 hypothetical protein. | KEGG: pap:PSPA7_3915 hypothetical protein. | 0.615 |