STRINGSTRING
AEF22327.1 AEF22327.1 AEF22328.1 AEF22328.1 AEF22309.1 AEF22309.1 AEF23017.1 AEF23017.1 AEF22310.1 AEF22310.1 AEF20581.1 AEF20581.1 AEF22311.1 AEF22311.1 AEF20875.1 AEF20875.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF22327.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pau:PA14_32410 transcriptional regulator MexT; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
AEF22328.1
NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: pmy:Pmen_2184 alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase.
  
  
 0.911
AEF22309.1
KEGG: pmy:Pmen_2179 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
  
  
 0.708
AEF23017.1
Regulatory protein LacI; KEGG: psp:PSPPH_2905 transcriptional regulatory protein NfxB; manually curated; PFAM: HTH transcriptional regulator, LacI.
  
 
 
 0.669
AEF22310.1
KEGG: pmy:Pmen_2180 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein.
  
  
 0.549
AEF20581.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: psa:PST_3626 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
      
 0.469
AEF22311.1
KEGG: pmy:Pmen_2181 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.464
AEF20875.1
KEGG: pmy:Pmen_3717 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
   
  
 0.419
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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