STRINGSTRING
Plav_3286 Plav_3286 Plav_3287 Plav_3287 Plav_3285 Plav_3285 Plav_3284 Plav_3284
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_3286KEGG: pau:PA14_36930 hypothetical protein. (178 aa)    
Predicted Functional Partners:
Plav_3287
KEGG: psb:Psyr_0769 conserved hypothetical membrane-anchored protein.
       0.776
Plav_3285
KEGG: rsq:Rsph17025_2827 membrane protein-like protein.
       0.537
Plav_3284
KEGG: ppu:PP_3329 hypothetical protein.
       0.509
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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