STRINGSTRING
Plav_0586 Plav_0586 Plav_1797 Plav_1797 Plav_0870 Plav_0870 Plav_1347 Plav_1347 Plav_0585 Plav_0585 Plav_2027 Plav_2027 Plav_0391 Plav_0391 Plav_3468 Plav_3468 Plav_1665 Plav_1665 Plav_0587 Plav_0587 Plav_2016 Plav_2016
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Plav_0586KEGG: pau:PA14_37380 putative flavin-binding monooxygenase. (514 aa)    
Predicted Functional Partners:
Plav_1797
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein.
 
  
 0.747
Plav_0870
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ppd:Ppro_3541 alpha/beta hydrolase fold-3 domain protein.
 
  
 0.742
Plav_1347
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: gbe:GbCGDNIH1_2223 caprolactone hydrolase.
 
  
 0.602
Plav_0585
Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.501
Plav_2027
PFAM: Saccharopine dehydrogenase; KEGG: ilo:IL1477 hypothetical protein.
  
   
 0.479
Plav_0391
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_1266 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.465
Plav_3468
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mes:Meso_4111 potassium transporter (trk family).
  
     0.464
Plav_1665
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase.
 
  
 0.443
Plav_0587
KEGG: aba:Acid345_2195 hypothetical protein.
       0.436
Plav_2016
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bte:BTH_I2358 lipase/esterase.
 
  
 0.427
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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