Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Hhal_0378 | Hhal_0379 | Hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | 0.675 |
Hhal_0378 | Hhal_0380 | Hypothetical protein. | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | 0.675 |
Hhal_0378 | Hhal_0381 | Hypothetical protein. | KEGG: mth:MTH452 hypothetical protein. | 0.675 |
Hhal_0378 | Hhal_0382 | Hypothetical protein. | KEGG: aha:AHA_3505 NAD dependent epimerase/dehydratase family. | 0.675 |
Hhal_0378 | Hhal_0383 | Hypothetical protein. | Heme utilization protein HuvX; PFAM: protein of unknown function DUF1008; KEGG: yps:YPTB0343 hypothetical protein. | 0.675 |
Hhal_0378 | Hhal_0384 | Hypothetical protein. | Coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: yps:YPTB0344 putative coproporphyrinogen III oxidase. | 0.675 |
Hhal_0378 | Hhal_0385 | Hypothetical protein. | PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pau:PA14_39650 putative TonB-dependent receptor. | 0.670 |
Hhal_0379 | Hhal_0378 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | Hypothetical protein. | 0.675 |
Hhal_0379 | Hhal_0380 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | 0.994 |
Hhal_0379 | Hhal_0381 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | KEGG: mth:MTH452 hypothetical protein. | 0.792 |
Hhal_0379 | Hhal_0382 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | KEGG: aha:AHA_3505 NAD dependent epimerase/dehydratase family. | 0.773 |
Hhal_0379 | Hhal_0383 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | Heme utilization protein HuvX; PFAM: protein of unknown function DUF1008; KEGG: yps:YPTB0343 hypothetical protein. | 0.817 |
Hhal_0379 | Hhal_0384 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | Coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: yps:YPTB0344 putative coproporphyrinogen III oxidase. | 0.821 |
Hhal_0379 | Hhal_0385 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pau:PA14_39650 putative TonB-dependent receptor. | 0.770 |
Hhal_0380 | Hhal_0378 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | Hypothetical protein. | 0.675 |
Hhal_0380 | Hhal_0379 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0282 ABC transporter, ATP-binding protein. | 0.994 |
Hhal_0380 | Hhal_0381 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | KEGG: mth:MTH452 hypothetical protein. | 0.792 |
Hhal_0380 | Hhal_0382 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | KEGG: aha:AHA_3505 NAD dependent epimerase/dehydratase family. | 0.773 |
Hhal_0380 | Hhal_0383 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | Heme utilization protein HuvX; PFAM: protein of unknown function DUF1008; KEGG: yps:YPTB0343 hypothetical protein. | 0.836 |
Hhal_0380 | Hhal_0384 | PFAM: cobalt transport protein; KEGG: tde:TDE0905 hypothetical protein. | Coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: yps:YPTB0344 putative coproporphyrinogen III oxidase. | 0.863 |
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