STRINGSTRING
Tola_0199 Tola_0199 Tola_0195 Tola_0195 Tola_0198 Tola_0198 Tola_0197 Tola_0197 Tola_0194 Tola_0194 Tola_0193 Tola_0193 Tola_0196 Tola_0196 clpP clpP Tola_0209 Tola_0209 Tola_0202 Tola_0202 Tola_0205 Tola_0205
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Tola_0199Type VI secretion ATPase, ClpV1 family; KEGG: pau:PA14_42980 putative ClpA/B-type protease; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Belongs to the ClpA/ClpB family. (869 aa)    
Predicted Functional Partners:
Tola_0195
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: pmy:Pmen_0091 hypothetical protein.
 
 
 0.964
Tola_0198
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: pag:PLES_36661 hypothetical protein.
 
  
 0.944
Tola_0197
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: pmy:Pmen_0095 hypothetical protein.
 
  
 0.936
Tola_0194
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: pmy:Pmen_0090 hypothetical protein.
 
  
 0.919
Tola_0193
TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: pau:PA14_43050 hypothetical protein.
 
  
 0.898
Tola_0196
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: pen:PSEEN0525 hypothetical protein.
 
  
 0.898
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.831
Tola_0209
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pmy:Pmen_0820 rhs element Vgr protein.
 
  
 0.829
Tola_0202
TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: pst:PSPTO_5422 FHA domain-containing protein.
 
 
 0.824
Tola_0205
TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: pau:PA14_42910 hypothetical protein.
 
  
 0.819
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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