STRINGSTRING
Spro_2687 Spro_2687 Spro_1453 Spro_1453 Spro_2686 Spro_2686 Spro_3743 Spro_3743 Spro_1332 Spro_1332 Spro_1333 Spro_1333 Spro_2688 Spro_2688
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_2687PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_47640 putative major facilitator superfamily (MFS) transporter. (504 aa)    
Predicted Functional Partners:
Spro_1453
PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4158 putative transport protein.
  
     0.745
Spro_2686
PFAM: regulatory protein TetR; KEGG: pau:PA14_47610 putative transcriptional regulator.
 
   
 0.686
Spro_3743
TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A.
 
 
 0.493
Spro_1332
PFAM: secretion protein HlyD family protein; KEGG: ppu:PP_1272 multidrug efflux MFS membrane fusion protein, putative.
 
 
 0.471
Spro_1333
PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1.
  
     0.447
Spro_2688
PFAM: Ferritin Dps family protein; KEGG: vco:VC0395_A2381 DPS family protein; Belongs to the Dps family.
       0.445
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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