STRINGSTRING
Oter_4156 Oter_4156 Oter_4157 Oter_4157 Oter_0391 Oter_0391 Oter_4155 Oter_4155
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4156PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: pau:PA14_50300 hypothetical protein. (364 aa)    
Predicted Functional Partners:
Oter_4157
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: dra:DR_2604 4-diphosphocytidyl-2C-methyl-D-erythritol synthase.
  
  
 0.821
Oter_0391
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mta:Moth_0746 flagellar hook-associated protein FlgK.
  
    0.552
Oter_4155
PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A0558 putative acetyltransferase.
       0.462
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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