STRINGSTRING
ABP76338.1 ABP76338.1 ABP76336.1 ABP76336.1 ABP76337.1 ABP76337.1 ABP77599.1 ABP77599.1 ABP76341.1 ABP76341.1 ABP76339.1 ABP76339.1 ABP76340.1 ABP76340.1 ABP76342.1 ABP76342.1 ABP76308.1 ABP76308.1 ABP77168.1 ABP77168.1 ABP76309.1 ABP76309.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP76338.1PFAM: Methyltransferase type 12; KEGG: pau:PA14_50330 hypothetical protein. (246 aa)    
Predicted Functional Partners:
ABP76336.1
KEGG: pau:PA14_50310 possible sugar nucleotidyltransferase.
  
  
 0.949
ABP76337.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pau:PA14_50320 hypothetical protein.
  
 
 0.885
ABP77599.1
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: shm:Shewmr7_3986 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
  
  
 0.839
ABP76341.1
PFAM: acyl-protein synthetase, LuxE; KEGG: sus:Acid_1364 acyl-protein synthetase, LuxE.
  
  
 0.764
ABP76339.1
Hypothetical protein; KEGG: bfr:BF2579 putative cholinephosphotransferase.
       0.741
ABP76340.1
KEGG: sus:Acid_1365 hypothetical protein.
       0.741
ABP76342.1
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro07030 possible acyl-CoA synthetase.
       0.741
ABP76308.1
TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: son:SO3239 flagellar hook-associated protein FlgL.
  
    0.696
ABP77168.1
TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: sdn:Sden_3641 flagellin-like protein.
  
    0.696
ABP76309.1
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: she:Shewmr4_1268 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.692
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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