STRINGSTRING
Amir_0752 Amir_0752 Amir_0749 Amir_0749 Amir_0751 Amir_0751 Amir_0754 Amir_0754 Amir_0750 Amir_0750 Amir_5515 Amir_5515 Amir_7088 Amir_7088 Amir_0753 Amir_0753 Amir_2698 Amir_2698 Amir_2760 Amir_2760 Amir_3007 Amir_3007
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_0752KEGG: pau:PA14_50860 hypothetical protein. (400 aa)    
Predicted Functional Partners:
Amir_0749
Hypothetical protein; KEGG: aeh:Mlg_1077 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.959
Amir_0751
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0445 ABC transporter ATP-binding protein.
 
     0.949
Amir_0754
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase.
 
     0.804
Amir_0750
Hypothetical protein; KEGG: proteophosphoglycan 5.
       0.773
Amir_5515
Hypothetical protein; KEGG: rso:RSp1372 NosY transmembrane protein.
 
     0.754
Amir_7088
PFAM: cell wall hydrolase/autolysin; Peptidoglycan- binding domain 1 protein; SMART: cell wall hydrolase/autolysin; KEGG: bha:BH3665 N-acetylmuramoyl-L-alanine amidase (major autolysin).
   
   0.742
Amir_0753
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: met:M446_6140 two component transcriptional regulator.
 
   
 0.724
Amir_2698
PFAM: protein of unknown function DUF214; KEGG: gme:Gmet_1517 hypothetical protein.
   
 
 0.655
Amir_2760
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_6766 ABC transporter, permease protein.
   
 
 0.655
Amir_3007
PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1312 hypothetical protein.
   
 
 0.655
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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