STRINGSTRING
EGV19156.1 EGV19156.1 EGV19157.1 EGV19157.1 EGV19159.1 EGV19159.1 EGV19158.1 EGV19158.1 EGV16630.1 EGV16630.1 EGV16985.1 EGV16985.1 EGV19155.1 EGV19155.1 EGV18126.1 EGV18126.1 EGV19863.1 EGV19863.1 EGV16631.1 EGV16631.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV19156.1PFAM: RDD; KEGG: pau:PA14_56100 hypothetical protein. (232 aa)    
Predicted Functional Partners:
EGV19157.1
PFAM: Protein of unknown function DUF95, transmembrane; KEGG: pst:PSPTO_4318 integral membrane protein.
 
    0.969
EGV19159.1
KEGG: pau:PA14_56140 hypothetical protein.
 
    0.963
EGV19158.1
KEGG: sde:Sde_0411 hypothetical protein.
 
    0.960
EGV16630.1
PFAM: Protein of unknown function DUF58; KEGG: protein of unknown function DUF58.
 
    0.864
EGV16985.1
KEGG: alv:Alvin_1022 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; Belongs to the HSP15 family.
   
    0.714
EGV19155.1
PFAM: Protein of unknown function DUF98; KEGG: alv:Alvin_2970 hypothetical protein.
       0.637
EGV18126.1
KEGG: alv:Alvin_2718 hypothetical protein.
 
    0.469
EGV19863.1
Protein of unknown function UPF0227; PFAM: Uncharacterised protein family UPF0227; KEGG: tcx:Tcr_1247 hypothetical protein.
  
     0.444
EGV16631.1
KEGG: pfl:PFL_4793 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core.
 
    0.410
Your Current Organism:
Thiocapsa marina
NCBI taxonomy Id: 768671
Other names: T. marina 5811, Thiocapsa marina 5811, Thiocapsa marina str. 5811, Thiocapsa marina strain 5811
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