STRINGSTRING
Caul_4096 Caul_4096 Caul_4095 Caul_4095 Caul_4093 Caul_4093 Caul_4094 Caul_4094 Caul_3080 Caul_3080 Caul_1087 Caul_1087 Caul_3338 Caul_3338 Caul_3931 Caul_3931 Caul_0806 Caul_0806 Caul_1280 Caul_1280 Caul_1336 Caul_1336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4096PFAM: secretion protein HlyD family protein; KEGG: pau:PA14_60760 hypothetical protein. (431 aa)    
Predicted Functional Partners:
Caul_4095
PFAM: protein of unknown function DUF214; KEGG: pap:PSPA7_5233 probable permease of ABC transporter.
 
 
 0.898
Caul_4093
PFAM: outer membrane efflux protein; KEGG: bbt:BBta_5198 putative integral outer membrane protein with efflux pump domain.
 
 
 0.796
Caul_4094
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amr:AM1_5039 macrolide export ATP-binding/permease protein, putative.
 
 
 0.764
Caul_3080
PFAM: acriflavin resistance protein; KEGG: ccr:CC_1204 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.591
Caul_1087
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2312 acridine efflux pump (RND family).
 
 
 0.527
Caul_3338
PFAM: protein of unknown function DUF214; KEGG: ccr:CC_2090 hypothetical protein.
  
 
 0.496
Caul_3931
PFAM: acriflavin resistance protein; KEGG: ccr:CC_3120 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.496
Caul_0806
PFAM: acriflavin resistance protein; KEGG: ccr:CC_3197 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.486
Caul_1280
PFAM: acriflavin resistance protein; KEGG: rpc:RPC_3023 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.475
Caul_1336
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: ccr:CC_0807 AcrB/AcrD/AcrF family protein.
 
 
 0.473
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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