STRINGSTRING
Cpin_7078 Cpin_7078 Cpin_7080 Cpin_7080 Cpin_7079 Cpin_7079 Cpin_0963 Cpin_0963 Cpin_0456 Cpin_0456 Cpin_2830 Cpin_2830 Cpin_2752 Cpin_2752 Cpin_7076 Cpin_7076 Cpin_6878 Cpin_6878 Cpin_1144 Cpin_1144 Cpin_0558 Cpin_0558
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_7078KEGG: pau:PA14_60770 putative outer membrane protein. (491 aa)    
Predicted Functional Partners:
Cpin_7080
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: swp:swp_2894 membrane-fusion protein, putative.
 
  0.957
Cpin_7079
PFAM: protein of unknown function DUF214; KEGG: sus:Acid_4101 hypothetical protein.
 
  0.900
Cpin_0963
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_3323 secretion protein HlyD.
 
 0.645
Cpin_0456
PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
  
  0.622
Cpin_2830
KEGG: mfa:Mfla_2222 secretion protein HlyD.
 
 0.598
Cpin_2752
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
 
 0.592
Cpin_7076
Hypothetical protein; KEGG: FAP157; flagellar associated protein.
  
    0.549
Cpin_6878
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
  
  0.537
Cpin_1144
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1649 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.535
Cpin_0558
PFAM: secretion protein HlyD family protein; KEGG: vsp:VS_II0849 multidrug resistance protein A.
  
 0.530
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.