STRINGSTRING
Pden_2461 Pden_2461 Pden_2460 Pden_2460 Pden_2462 Pden_2462 Pden_2456 Pden_2456 Pden_2135 Pden_2135 Pden_3925 Pden_3925 Pden_1931 Pden_1931 Pden_0537 Pden_0537 Pden_2457 Pden_2457 Pden_1407 Pden_1407 Pden_4338 Pden_4338
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pden_2461TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: pau:PA14_61200 hypothetical protein. (1637 aa)    
Predicted Functional Partners:
Pden_2460
PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: pau:PA14_61190 putative hemolysin activation/secretion protein.
 
 
 0.944
Pden_2462
PFAM: Sel1 domain protein repeat-containing protein; peptidase C14, caspase catalytic subunit p20; SMART: peptidase C14, caspase precursor p45; KEGG: mlo:mlr2366 hypothetical protein.
 
     0.940
Pden_2456
PFAM: protein of unknown function DUF1215; KEGG: rsp:RSP_3490 hypothetical protein.
 
   
 0.820
Pden_2135
KEGG: cel:ZK84.1 Hypothetical protein ZK84.1.
 
 
 0.807
Pden_3925
KEGG: jan:Jann_1578 transcriptional regulator, SARP family.
  
    0.776
Pden_1931
KEGG: rsp:RSP_6052 hypothetical protein.
  
     0.766
Pden_0537
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein.
  
   
 0.758
Pden_2457
KEGG: rsp:RSP_3491 hypothetical protein.
 
    0.758
Pden_1407
KEGG: rsp:RSP_2286 hypothetical protein.
  
     0.753
Pden_4338
KEGG: mes:Meso_2597 PE-PGRS family protein.
 
     0.738
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.