STRINGSTRING
Dalk_3273 Dalk_3273 Dalk_4144 Dalk_4144 Dalk_3659 Dalk_3659 Dalk_5182 Dalk_5182 Dalk_3215 Dalk_3215 Dalk_3318 Dalk_3318 Dalk_4036 Dalk_4036 Dalk_4506 Dalk_4506 Dalk_2469 Dalk_2469 Dalk_2468 Dalk_2468 Dalk_3312 Dalk_3312
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dalk_3273PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pau:PA14_66350 putative acyl-CoA dehydrogenase; IMG reference gene:2503009003; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain. (602 aa)    
Predicted Functional Partners:
Dalk_4144
Pyruvate-ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; IMG reference gene:2503009890; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin [...]
  
 
 0.831
Dalk_3659
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dol:Dole_0155 3-hydroxyacyl-CoA dehydrogenase NAD-binding; IMG reference gene:2503009403; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.791
Dalk_5182
Electron transfer flavoprotein (Etf), alpha subunit; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cbk:CLL_A0376 electron transfer flavoprotein, alpha subunit/FixB family protein; IMG reference gene:2503010941; PFAM: Cupin domain; Helix-turn-helix; Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 0.748
Dalk_3215
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: dol:Dole_1419 electron transfer flavoprotein alpha subunit; IMG reference gene:2503008944; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.639
Dalk_3318
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: dol:Dole_1419 electron transfer flavoprotein alpha subunit; IMG reference gene:2503009048; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.623
Dalk_4036
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: tte:TTE0547 electron transfer flavoprotein subunit alpha; IMG reference gene:2503009781; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.623
Dalk_4506
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: esi:Exig_2165 electron transfer flavoprotein alpha subunit; IMG reference gene:2503010257; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.623
Dalk_2469
PFAM: aminoglycoside phosphotransferase; KEGG: dol:Dole_1459 aminoglycoside phosphotransferase; IMG reference gene:2503008190; PFAM: Phosphotransferase enzyme family.
 
 0.612
Dalk_2468
PFAM: aminoglycoside phosphotransferase; KEGG: dol:Dole_1459 aminoglycoside phosphotransferase; IMG reference gene:2503008189; PFAM: Phosphotransferase enzyme family.
 
 0.600
Dalk_3312
KEGG: dol:Dole_2079 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; IMG reference gene:2503009042; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD.
   
 0.597
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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