STRINGSTRING
Maqu_1439 Maqu_1439 Maqu_1440 Maqu_1440 Maqu_2490 Maqu_2490 Maqu_3836 Maqu_3836 Maqu_3068 Maqu_3068 Maqu_0645 Maqu_0645 Maqu_0440 Maqu_0440 Maqu_0610 Maqu_0610 Maqu_2843 Maqu_2843
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_1439KEGG: pau:PA14_66450 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Maqu_1440
KEGG: cvi:CV1119 hypothetical protein.
       0.495
Maqu_2490
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: hch:HCH_02185 3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.458
Maqu_3836
KEGG: pfl:PFL_1770 hypothetical protein.
 
     0.437
Maqu_3068
PFAM: regulatory protein, TetR; KEGG: abo:ABO_1718 transcriptional regulator, TetR family.
  
     0.415
Maqu_0645
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: abo:ABO_0193 hypothetical protein.
  
     0.412
Maqu_0440
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: abo:ABO_2707 alkane 1-monooxygenase.
  
     0.407
Maqu_0610
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: abo:ABO_2707 alkane 1-monooxygenase.
  
     0.407
Maqu_2843
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: aci:ACIAD1411 terminal alkane-1-monooxygenase.
  
     0.401
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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