STRINGSTRING
Spro_0801 Spro_0801 Spro_0802 Spro_0802 Spro_0800 Spro_0800 Spro_3733 Spro_3733 Spro_3736 Spro_3736 Spro_3735 Spro_3735 Spro_1445 Spro_1445 Spro_3734 Spro_3734 Spro_0799 Spro_0799 Spro_0803 Spro_0803 hutU hutU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_0801PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pau:PA14_67280 putative amino acid transporter permease protein. (281 aa)    
Predicted Functional Partners:
Spro_0802
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pfo:Pfl_0362 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.999
Spro_0800
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA5094 putative glycine betaine/proline transport system ATP-binding protein.
 0.998
Spro_3733
KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 0.994
Spro_3736
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: eca:ECA3504 glycine betaine-binding periplasmic protein precursor.
 
 0.973
Spro_3735
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ypi:YpsIP31758_1059 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein.
 
 0.969
Spro_1445
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 putative substrate-binding transport protein.
 
  
 0.931
Spro_3734
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3503 glycine betaine/L-proline transport system permease protein.
  
  
 
0.907
Spro_0799
KEGG: psb:Psyr_4832 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.804
Spro_0803
PFAM: amino acid permease-associated region; KEGG: yen:YE4093 amino acid permease.
  
    0.479
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
    0.471
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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