STRINGSTRING
Rpic_1343 Rpic_1343 Rpic_0762 Rpic_0762 Rpic_3810 Rpic_3810 Rpic_0763 Rpic_0763 Rpic_3811 Rpic_3811 Rpic_0014 Rpic_0014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpic_1343PFAM: Fimbrial protein; KEGG: pau:PA14_69760 putative fimbrial protein. (315 aa)    
Predicted Functional Partners:
Rpic_0762
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl_3043 pili assembly chaperone.
  
 
 0.828
Rpic_3810
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl_3043 pili assembly chaperone.
  
 
 0.828
Rpic_0763
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl_3044 fimbrial biogenesis outer membrane usher protein.
  
 
 0.668
Rpic_3811
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl_3044 fimbrial biogenesis outer membrane usher protein.
  
 
 0.668
Rpic_0014
PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RSc1779 probable activation/secretion signal peptide protein.
   
  
 0.654
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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