STRINGSTRING
Maqu_3306 Maqu_3306 Maqu_3006 Maqu_3006 Maqu_0213 Maqu_0213 Maqu_3305 Maqu_3305 Maqu_3304 Maqu_3304 Maqu_3302 Maqu_3302 Maqu_3303 Maqu_3303 Maqu_1164 Maqu_1164 Maqu_3307 Maqu_3307 Maqu_3492 Maqu_3492 Maqu_0883 Maqu_0883
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maqu_3306Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pau:PA14_70710 glc operon transcriptional activator. (253 aa)    
Predicted Functional Partners:
Maqu_3006
PFAM: regulatory protein GntR, HTH; KEGG: hch:HCH_04733 transcriptional regulator.
  
     0.628
Maqu_0213
Transcriptional regulator, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: tbd:Tbd_2301 transcriptional regulator, GntR family.
  
   
 0.562
Maqu_3305
PFAM: protein of unknown function DUF336; KEGG: cps:CPS_4893 putative GlcG protein.
 
     0.546
Maqu_3304
PFAM: FAD linked oxidase domain protein; KEGG: par:Psyc_1650 glycolate oxidase subunit D.
 
     0.544
Maqu_3302
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: par:Psyc_1652 glycolate oxidase iron-sulfur subunit.
 
     0.537
Maqu_3303
PFAM: FAD linked oxidase domain protein; KEGG: par:Psyc_1651 glycolate oxidase subunit GlcE.
 
     0.525
Maqu_1164
PFAM: regulatory protein GntR, HTH; KEGG: hch:HCH_04733 transcriptional regulator.
  
     0.516
Maqu_3307
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_05213 ABC-type histidine transport system, ATPase component; TC 3.A.1.3.-.
       0.471
Maqu_3492
Regulatory protein, IclR; PFAM: protein of unknown function UPF0074; regulatory proteins, IclR; Helix-turn-helix, type 11 domain protein; KEGG: mfa:Mfla_2558 transcriptional regulator, IclR family.
  
  
 0.447
Maqu_0883
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: hch:HCH_05915 acetolactate synthase, small subunit.
   
    0.408
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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