STRINGSTRING
Veis_4047 Veis_4047 Veis_4048 Veis_4048 Veis_4049 Veis_4049 Veis_4046 Veis_4046 Veis_4053 Veis_4053 Veis_4052 Veis_4052 Veis_4695 Veis_4695 Veis_0207 Veis_0207 Veis_0753 Veis_0753 Veis_2740 Veis_2740 Veis_3036 Veis_3036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_4047PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: pau:PA14_71490 sarcosine oxidase delta subunit. (117 aa)    
Predicted Functional Partners:
Veis_4048
KEGG: cps:CPS_4034 sarcosine oxidase, alpha subunit; TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein, C-terminal barrel; Belongs to the GcvT family.
 
 0.999
Veis_4049
PFAM: Sarcosine oxidase, gamma subunit; KEGG: pau:PA14_71510 sarcosine oxidase gamma subunit.
 
 0.999
Veis_4046
TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: csa:Csal_0998 sarcosine oxidase, beta subunit family.
 
 0.996
Veis_4053
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bte:BTH_II1865 oxidoreductase, FAD/FMN-binding.
 
 
 0.967
Veis_4052
KEGG: bte:BTH_II1866 V4R domain protein.
 
    0.948
Veis_4695
PFAM: FAD dependent oxidoreductase; KEGG: reh:H16_B2189 D-amino-acid dehydrogenase.
 
 0.939
Veis_0207
PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7190 putative sarcosine oxidase beta subunit.
  
 0.930
Veis_0753
PFAM: FAD dependent oxidoreductase; KEGG: rfr:Rfer_0884 FAD dependent oxidoreductase.
  
 0.930
Veis_2740
PFAM: FAD dependent oxidoreductase; KEGG: rle:RL4485 putative ferredoxin containing dehydrogenase.
  
 0.930
Veis_3036
PFAM: FAD dependent oxidoreductase; KEGG: reh:H16_B2189 D-amino-acid dehydrogenase.
  
 0.930
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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