STRINGSTRING
Elen_0187 Elen_0187 Elen_2928 Elen_2928 Elen_0188 Elen_0188 Elen_2995 Elen_2995 Elen_0186 Elen_0186 Elen_1829 Elen_1829
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0187PFAM: amino acid permease-associated region; KEGG: pau:PA14_72710 putative transporter. (466 aa)    
Predicted Functional Partners:
Elen_2928
PFAM: Acetamidase/Formamidase; KEGG: bha:BH0025 acetamidase.
 
     0.555
Elen_0188
PFAM: PfkB domain protein; KEGG: sed:SeD_A2488 kinase, PfkB family; Belongs to the carbohydrate kinase PfkB family.
   
 
 0.535
Elen_2995
PFAM: Acetamidase/Formamidase; KEGG: bcb:BCB4264_A2569 acetamidase/formamidase family protein.
 
     0.519
Elen_0186
PFAM: aminotransferase class I and II; KEGG: pca:Pcar_1888 aspartate aminotransferase.
  
  
 0.478
Elen_1829
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sse:Ssed_3234 general substrate transporter.
  
   
 0.428
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.