STRINGSTRING
bglX bglX PA1680 PA1680 tam tam PA3758 PA3758 PA1329 PA1329 pslD pslD pslB pslB pelF pelF nagZ nagZ mucR mucR ptxS ptxS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglXPeriplasmic beta-glucosidase; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the glycosyl hydrolase 3 family. (764 aa)    
Predicted Functional Partners:
PA1680
Hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
     
 0.883
tam
Hypothetical protein; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
      
 0.881
PA3758
Probable N-acetylglucosamine-6-phosphate deacetylase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
  
  
 0.705
PA1329
Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences).
      
 0.700
pslD
PslD; Class 1: Function experimentally demonstrated in P. aeruginosa.
      
 0.629
pslB
PslB; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.626
pelF
PelF; Class 1: Function experimentally demonstrated in P. aeruginosa.
      
 0.589
nagZ
beta-N-acetyl-D-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (By similarity). Contributes to intrinsic fosfomycin resistance in P.aeruginosa ; Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
   
 0.577
mucR
MucR; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
  
  
 0.558
ptxS
Transcriptional regulator PtxS; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
 
   
 0.553
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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