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pslA pslA pslB pslB pslD pslD pslC pslC pslE pslE pslJ pslJ pslH pslH pslF pslF algA algA pslI pslI arnB arnB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pslAPslA; Class 1: Function experimentally demonstrated in P. aeruginosa. (478 aa)    
Predicted Functional Partners:
pslB
PslB; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.999
pslD
PslD; Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.997
pslC
PslC; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.994
pslE
PslE; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.991
pslJ
PslJ; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.985
pslH
PslH; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
  
  
 0.977
pslF
PslF; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.972
algA
Phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.972
pslI
PslI; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
  
 0.968
arnB
ArnB; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
 
  
 0.968
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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