Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA1226 | PA2270 | PA1226 | PA2270 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.611 |
| PA2269 | PA2270 | PA2269 | PA2270 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.666 |
| PA2269 | PA2271 | PA2269 | PA2271 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | 0.528 |
| PA2270 | PA1226 | PA2270 | PA1226 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.611 |
| PA2270 | PA2269 | PA2270 | PA2269 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.666 |
| PA2270 | PA2271 | PA2270 | PA2271 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | 0.817 |
| PA2270 | PA4173 | PA2270 | PA4173 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.628 |
| PA2270 | nalD | PA2270 | PA3574 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | NalD; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | 0.569 |
| PA2270 | pbpC | PA2270 | PA2272 | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Penicillin-binding protein 3A; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin. Belongs to the transpeptidase family. FtsI subfamily. | 0.507 |
| PA2271 | PA2269 | PA2271 | PA2269 | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.528 |
| PA2271 | PA2270 | PA2271 | PA2270 | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.817 |
| PA2271 | pbpC | PA2271 | PA2272 | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | Penicillin-binding protein 3A; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin. Belongs to the transpeptidase family. FtsI subfamily. | 0.500 |
| PA4173 | PA2270 | PA4173 | PA2270 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.628 |
| nalD | PA2270 | PA3574 | PA2270 | NalD; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa. | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.569 |
| pbpC | PA2270 | PA2272 | PA2270 | Penicillin-binding protein 3A; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin. Belongs to the transpeptidase family. FtsI subfamily. | Probable transcriptional regulator; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.507 |
| pbpC | PA2271 | PA2272 | PA2271 | Penicillin-binding protein 3A; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin. Belongs to the transpeptidase family. FtsI subfamily. | Probable acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It can use a variety of substrates including spermidine, spermine and N(8)-acetylspermidine, 7-aminocephalosporanic acid, colistin and thiamine. | 0.500 |