Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA2471 | PA2473 | PA2471 | PA2473 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.832 |
| PA2471 | PA4128 | PA2471 | PA4128 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); Belongs to the HpcH/HpaI aldolase family. | 0.848 |
| PA2471 | fahA | PA2471 | PA2008 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Fumarylacetoacetase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.901 |
| PA2471 | fumC1 | PA2471 | PA4470 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.831 |
| PA2471 | fumC2 | PA2471 | PA0854 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.830 |
| PA2471 | gtdA | PA2471 | PA2470 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Gentisate 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.948 |
| PA2471 | sdhA | PA2471 | PA1583 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Succinate dehydrogenase (A subunit); Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.824 |
| PA2471 | sdhB | PA2471 | PA1584 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Succinate dehydrogenase (B subunit); Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.811 |
| PA2471 | sdhC | PA2471 | PA1581 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Succinate dehydrogenase (C subunit); Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.805 |
| PA2471 | sdhD | PA2471 | PA1582 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | Succinate dehydrogenase (D subunit); Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.806 |
| PA2473 | PA2471 | PA2473 | PA2471 | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.832 |
| PA2473 | PA4128 | PA2473 | PA4128 | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); Belongs to the HpcH/HpaI aldolase family. | 0.414 |
| PA2473 | fahA | PA2473 | PA2008 | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Fumarylacetoacetase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.984 |
| PA2473 | gtdA | PA2473 | PA2470 | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Gentisate 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.886 |
| PA4128 | PA2471 | PA4128 | PA2471 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); Belongs to the HpcH/HpaI aldolase family. | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.848 |
| PA4128 | PA2473 | PA4128 | PA2473 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); Belongs to the HpcH/HpaI aldolase family. | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.414 |
| PA4128 | gtdA | PA4128 | PA2470 | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences); Belongs to the HpcH/HpaI aldolase family. | Gentisate 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.758 |
| fahA | PA2471 | PA2008 | PA2471 | Fumarylacetoacetase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Conserved hypothetical protein; Product name confidence: Class 4 (Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences). | 0.901 |
| fahA | PA2473 | PA2008 | PA2473 | Fumarylacetoacetase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable glutathione S-transferase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.984 |
| fahA | fumC1 | PA2008 | PA4470 | Fumarylacetoacetase; Product name confidence: Class 2 (High similarity to functionally studied protein). | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.876 |
page 1 of 4