Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PA0480 | antA | PA0480 | PA2512 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.420 |
| PA0480 | antB | PA0480 | PA2513 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.465 |
| PA0480 | antC | PA0480 | PA2514 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.528 |
| PA0480 | catA | PA0480 | PA2507 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Catechol 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.743 |
| PA0480 | catB | PA0480 | PA2509 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Muconate cycloisomerase I; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.771 |
| PA0480 | catC | PA0480 | PA2508 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Muconolactone delta-isomerase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.975 |
| PA0480 | pcaC | PA0480 | PA0232 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Gamma-carboxymuconolactone decarboxylase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.998 |
| PA0480 | pcaD | PA0480 | PA0231 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Beta-ketoadipate enol-lactone hydrolase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.907 |
| PA0480 | xylL | PA0480 | PA2515 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Cis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.712 |
| PA0480 | xylZ | PA0480 | PA2516 | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | Toluate 1,2-dioxygenase electron transfer component; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.563 |
| antA | PA0480 | PA2512 | PA0480 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Probable hydrolase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). | 0.420 |
| antA | antB | PA2512 | PA2513 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Anthranilate dioxygenase small subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.999 |
| antA | antC | PA2512 | PA2514 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Anthranilate dioxygenase reductase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.999 |
| antA | catA | PA2512 | PA2507 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Catechol 1,2-dioxygenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.980 |
| antA | catB | PA2512 | PA2509 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Muconate cycloisomerase I; Product name confidence: Class 2 (High similarity to functionally studied protein); Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.946 |
| antA | catC | PA2512 | PA2508 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Muconolactone delta-isomerase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.989 |
| antA | pcaC | PA2512 | PA0232 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Gamma-carboxymuconolactone decarboxylase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.546 |
| antA | pcaD | PA2512 | PA0231 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Beta-ketoadipate enol-lactone hydrolase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.644 |
| antA | xylL | PA2512 | PA2515 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Cis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.865 |
| antA | xylZ | PA2512 | PA2516 | Anthranilate dioxygenase large subunit; Product name confidence: Class 2 (High similarity to functionally studied protein). | Toluate 1,2-dioxygenase electron transfer component; Product name confidence: Class 2 (High similarity to functionally studied protein). | 0.874 |
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